Magdalen Lindeberg

The focus of my research activities is the bioinformatic analysis, identification of novel virulence factors, and web-based dissemination of information for Pseudomonas syringae pathovars.

Outreach and Extension Focus

My outreach activities are focused on the communication of genome sequence data and tools for genome analysis via the Pseudomonas Plant Interaction website. The intended audience for these sites ranges from other plant pathologists, microbiologists, growers, and high school students

Selected Journal Publications

Google Scholar profile and publications.

• Jones, L. A., Saha, S., Collmer, A., Smart, C. D., & Lindeberg, M. (2015). Genome-assisted development of a diagnostic protocol for distinguishing high virulence in Pseudomonas syringae pv tomato strains. Plant Disease. 99:527-534.
• Saha, S., & Lindeberg, M. (2013). Bound to succeed: Transcription factor binding site prediction and its contribution to understanding virulence and environmental adaptation in bacterial plant pathogens. Molecular Plant-Microbe Interactions. 26:1123-1130.
• Saha, S., Hunter, W. B., Reese, J., Morgan, J. K., Marutani-Hert, M., Huang, H., & Lindeberg, M. (2012). Survey of Endosymbionts in the Diaphorina citri Metagenome and Assembly of a Wolbachia wDi Draft Genome. PLOS One. 7:e50067.
• Lindeberg, M. (2012). Genome-enabled perspectives on the composition, evolution, and expression of virulence determinants in bacterial plant pathogens. Annual Review of Phytopathology. 50:11-132.
• Lindeberg, M., Cunnac, S., & Collmer, A. (2012). Pseudomonas syringae type III effector repertoires: last words in endless arguments. Trends in Microbiology. 20:199-208.
• Lindeberg, M. (2011). Information Management of Genome Enabled Data Streams for Pseudomonas syringae on the Pseudomonas-Plant Interaction (PPI) Website. Genes. 2:841-852.
• Cai, R., Lewis, J., Yan, S., Clarke, C., Campanile, F., Almeida, N., Studholme, D., Lindeberg, M., Schneider, D. J., Zaccardelli, M., Setubal, J., Morales-Lizcano, N., Bernal, A., Coaker, G., Baker, C., Bender, C., Leman, S., & Vinatzer, B. (2011). The plant pathogen Pseudomonas syringae pv. tomato is genetically monomorphic and under strong selection to evade tomato immunity. PLoS Pathogens. 7:e1002130.
• Torto-Alalibo, T., Collmer, C. W., Gwinn-Giglio, M., Lindeberg, M., Meng, S., Chibucos, M. C., Tseng, T. T., Lomax, J., Biehl, B., Ireland, A., Bird, D., Dean, R. A., Glasner, J. D., Perna, N., Setubal, J. C., Collmer, A., & Tyler, B. M. (2010). Unifying Themes in Microbial Associations with Animal and Plant Hosts Described Using the Gene Ontology. Microbiology and Molecular Biology Reviews. 74:479 - 503.
• Filiatrault, M. J., Stodghill, P. V., Bronstein, P. A., Moll, S., Lindeberg, M., Grills, G., Schweitzer, P., Want, W., Schroth, G. P., Luo, S., Khrebtukova, I., Yang, Y., Thannhouser, T., Butcher, B. G., Cartinhour, S., & Schneider, D. J. (2010). Transcriptome analysis of Pseudomonas syringae identifies new genes, ncRNAs, and antisense activity. Journal of Bacteriology. 192:2359.
• Buell, C. R., Joardar, V., Lindeberg, M., Selengu, T. J., Paulsen, I. T., Gwinn, M. L., Dodson, R. J., Debov, R. T., Durkim, A. S., Kolonay, J. F., Madupu, R., Daugherty, S., Brinkac, L., Beanan, M. J., Haft, D. H., Nelson, W. C., Davidsen, T., Liu, J., Yuan, Q., Khouri, H., Fedorova, N., Tran, B., Russell, D., Berry, K., Utterback, T., Vanaken, S. E., Feldblyum, T. V., D'Ascenzo, M., Deng, W., Ramos, A. R., Alfano, J., Cartinhour, S., Chatterjee, A. K., Delaney, T. P., Lazarowitz, S. G., Martin, G. B., Schneider, D. J., Tang, X., Bender, C. L., White, O., Fraser, C. M., & Collmer, A. (2003). The complete sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv tomato DC3000. PNAS: Proceedings of the National Academy of Sciences of the United States of America. 100:10181-10186.